PLISM: Large-scale histological image dataset toward stain and device-agnostic models.<\/h5>\n
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Project page: https:\/\/p024eb.github.io\/<\/a> <\/p>\n Project page: https:\/\/dakomura.github.io\/SegPath\/<\/a> <\/p>\n Dataset (CosMx):\u00a0https:\/\/zenodo.org\/records\/8333281<\/a><\/p>\n Dataset (scRNAseq):https:\/\/data.humancellatlas.org\/explore\/projects\/cfece4d2-f18d-44ad-a46a-42bbcb5cb3b7<\/a><\/p>\n Paper:\u00a0https:\/\/www.cell.com\/cell-reports\/fulltext\/S2211-1247(23)01248-2<\/a><\/p>\n <\/p>\n Dataset: https:\/\/zenodo.org\/record\/5889558<\/a> \u00a0 Link: https:\/\/luigi-pathology.com\/<\/a> <\/p>\n Link: https:\/\/apps.apple.com\/jp\/app\/luigi\/id1246638302<\/a> <\/p>\n Github: https:\/\/github.com\/dakomura\/deep_texture_histology<\/a> <\/p>\n Github: https:\/\/github.com\/dermasugita\/Viola-SV<\/a> Dataset and Software \u25a0Dataset PLISM: Large-scale histological image datas …\u7d9a\u304d\u3092\u8aad\u3080<\/span><\/p>\n","protected":false},"author":1,"featured_media":17,"parent":0,"menu_order":970,"comment_status":"closed","ping_status":"closed","template":"tool-dataset.php","meta":{"footnotes":""},"class_list":["post-983","page","type-page","status-publish","has-post-thumbnail","hentry"],"aioseo_notices":[],"_links":{"self":[{"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/pages\/983","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/comments?post=983"}],"version-history":[{"count":4,"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/pages\/983\/revisions"}],"predecessor-version":[{"id":1301,"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/pages\/983\/revisions\/1301"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/"}],"wp:attachment":[{"href":"https:\/\/plaza.umin.ac.jp\/prm\/wp-json\/wp\/v2\/media?parent=983"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}
\nPaper: https:\/\/www.nature.com\/articles\/s41597-024-03122-5<\/a><\/p>\n
\nSegPath\u00a0: The largest-scale datasets for the segmentation of cancer histology images<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d02_001.jpg\")
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\nPaper: https:\/\/www.cell.com\/patterns\/fulltext\/S2666-3899(23)00019-3<\/a><\/p>\n
\nStomach Encyclopedia: Single-Cell and Spatial Transcriptome dataset of Human Stomach<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d03.jpg\")
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\nHistology images from uniform tumor regions in TCGA Whole Slide Images<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d04.jpg\")
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\nPaper: https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2211124722001486<\/a><\/p>\n
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\n\u25a0Software<\/strong><\/p>\nLuigi: Large Scale HistoPathological Image Retrieval System<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d05.jpg\")
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\nPaper: https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2211124722001486<\/a><\/p>\n
\nLuigi (iOS version)<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d06.jpg\")
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\nPaper: https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2211124722001486<\/a><\/p>\n
\ndeeptexture: Tools for deep texture representation for histology images<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d07.jpg\")
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\nDocument: https:\/\/deep-texture-histology.readthedocs.io\/en\/latest\/<\/a>
\nPaper: https:\/\/star-protocols.cell.com\/protocols\/2546<\/a><\/p>\n
\nViola: a structural variant signature extractor with user-defined classifications<\/h5>\n
![\"\"](\"https:\/\/plaza.umin.ac.jp\/prm\/wordpress\/wp-content\/uploads\/2023\/10\/d08.jpg\")
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\nDocument: https:\/\/viola-sv.readthedocs.io\/en\/1.0.x-stable-doc\/<\/a>
\nPaper: https:\/\/academic.oup.com\/bioinformatics\/article\/38\/2\/540\/6371863<\/a><\/p>\n
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